| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 9 | Timár Benjamin Sean (2014)Szhalombattai VUK SE | 43.77R:0.41 | - | 158 | |
| 2 | 8 | Kovács Benedek (2012)Csepeli Öttusa Vizis | 46.78R:0.82 | 03.01 | 130 | |
| 3 | 0 | Balla Zalán Benedek (2015)Szhalombattai VUK SE | 50.09R:0.57 | 06.32 | 106 | |
| 4 | 4 | Izsó Márton (2014)Ybl Waterpolo Club | 55.64R:0.64 | 11.87 | 77 | |
| 5 | 6 | Groszmann Noel István (2015)FTC | 56.48R:0.59 | 12.71 | 73 | |
| 6 | 2 | Zsidai Dániel (2016)FTC | 58.07R:0.83 | 14.30 | 68 | |
| 7 | 5 | Budai András (2016)FTC | 58.41R:0.73 | 14.64 | 66 | |
| 8 | 3 | Stettler Péter (2015)Hullám 91 | 59.07R:0.75 | 15.30 | 64 | |
| 9 | 1 | Szavéri Patrik (2015)Kőbánya Sport Club | 01:11.52R:0.58 | 27.75 | 36 | |
| - | 7 | Kardos Tibor Kristóf (2015)FTC | DNS |