| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Boári Benett (2008)Parafa Úszó Klub | 56.85 | - | 560 | |
50m27.42 R:0.64 100m56.8529.43 -
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| 2 | 5 | Rajcsányi Boldizsár (2007)Lőrinc Swim Team | 57.33 | 00.48 | 546 | |
50m27.69 R:0.66 100m57.3329.64 -
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| 3 | 3 | Takács Nimród (2007)A Jövő SC | 57.84 | 00.99 | 531 | |
50m27.87 R:0.73 100m57.8429.97 -
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| 4 | 8 | Ozsvárt Gábor (2009)Parafa Úszó Klub | 58.58 | 01.73 | 511 | |
50m28.23 R:0.49 100m58.5830.35 -
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| 5 | 1 | Nagy Kristóf (2009)Győri Úszó Sportegy. | 59.06 | 02.21 | 499 | |
50m28.65 R:0.75 100m59.0630.41 -
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| 6 | 6 | Medvei Barnabás (2006)Váci Vízmű SE | 59.30 | 02.45 | 493 | |
50m28.06 R:0.67 100m59.3031.24 -
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| 7 | 0 | Fónyi Pintér Iván (2008)Vasas Sport Club | 59.98 | 03.13 | 476 | |
50m29.07 R:0.66 100m59.9830.91 -
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| 8 | 9 | Chkhikvadze Andria (2008)Georgian Swimmers | 01:00.16 | 03.31 | 472 | |
50m28.16 R:0.65 100m01:00.1632.00 -
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| 9 | 2 | Hitter Norbert (2008)Flykick | 01:00.62 | 03.77 | 461 | |
50m28.45 R:0.65 100m01:00.6232.17 -
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| 10 | 7 | Zsolnai Péter (2009)Budapesti Honvéd | 01:00.87 | 04.02 | 456 | |
50m28.32 R:0.75 100m01:00.8732.55 -
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