| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Mozsárik Levente (2006)BÁCSVÍZ SC | 00:26.29R:0.62 | - | 607 | |
| 2 | 5 | Tóth Benedek Viktor (2006)Kőbánya Sport Club | 00:26.42R:0.64 | 00:00.13 | 598 | |
| 3 | 3 | Tóth Péter (2007)Debreceni Aquasport | 00:26.60R:0.63 | 00:00.31 | 586 | |
| 4 | 6 | Némedi-Varga Tamás (2006)Győri Úszó Sportegy. | 00:26.69R:0.64 | 00:00.40 | 580 | |
| 5 | 7 | Szombathelyi Péter (2007)Kaposvári SI | 00:27.24R:0.67 | 00:00.95 | 546 | |
| 6 | 2 | Virágh Zoárd Zoltán (2007)BVSC-Zugló | 00:27.48R:0.76 | 00:01.19 | 532 | |
| 7 | 1 | Li Chenxu (2007)Soproni Széchy T. SI | 00:27.83R:0.61 | 00:01.54 | 512 | |
| 8 | 8 | Mizsey Péter Pál (2007)Budafóka XXII. SE | 00:28.05R:0.62 | 00:01.76 | 500 | |
| 9 | 9 | Gacsal Gergely (2007)Mohácsi Torna Egylet | 00:28.45R:0.6 | 00:02.16 | 479 | |
| - | 0 | Leimeiszter Ábel (2006)Pápai Úszó SE | DNS |