| RK | Name | H/L | Time | Gap | Q |
|---|---|---|---|---|---|
| 1 | Sárkány Zalán (2003)Kőbánya Sport Club | 04:12.99 100.550% | - | D4 | |
| 2 | Holló Balázs (1999)BVSC-Zugló | 04:16.69 95.790% | 03.70 | D5 | |
| 3 | Selmeci Levente (2000)Szhalombattai VUK SE | 04:20.72 103.322% | 07.73 | D3 | |
| 4 | Kovács Botond (2007)BVSC-Zugló | 04:22.07 102.213% | 09.08 | D6 | |
| 5 | Zombori Gábor (2002)Újpesti Torna Egylet | 04:22.12 93.473% | 09.13 | D2 | |
| 6 | Versitz Ákos (2004)Ferencvárosi Torna Club | 04:22.76 98.927% | 09.77 | D7 | |
| 7 | Györe Ádám (2004)Egri Úszó Klub | 04:22.96 101.837% | 09.97 | D1 | |
| 8 | Kós Olivér (2005)BVSC-Zugló | 04:23.09 98.998% | 10.10 | D8 | |
| 9 | Kalmár Ákos (2000)Balaton ÚK Veszprém | 04:23.46 99.802% | 10.47 | T1 | |
| 10 | Juhász-Dóra Richárd (2005)Vasas Sport Club | 04:23.74 101.744% | 10.75 | T2 | |
| 11 | Miszlai Máté (2004)Kőbánya Sport Club | 04:25.86 104.617% | 12.87 | ||
| 12 | Poteczin Dániel (2006)Érdi Vízisport Kft | 04:30.42 102.755% | 17.43 | ||
| 13 | Kárpáti Máté (2008)Újpesti Torna Egylet | 04:30.65 99.007% | 17.66 | ||
| 14 | Barabás Imre Dávid (2004)Balaton ÚK Veszprém | 04:33.32 102.581% | 20.33 | ||
| 15 | Besenyi Istvan (2004)Nannestad IL | 04:33.36 98.868% | 20.37 | ||
| 16 | Koncz Márton (2008)Budaörsi Sport Club | 04:37.60 102.562% | 24.61 | ||
| 17 | Tóth Olivér (2007)Újpesti Torna Egylet | 04:38.69 100.018% | 25.70 | ||
| 18 | Buda Levente (2008)Győri Úszó Sportegy. | 04:39.19 98.543% | 26.20 | ||
| 19 | Pittlik Zsigmond (2008)Darnyi Tamás SC | 04:39.38 99.395% | 26.39 | ||
| 20 | Tohl Dániel Antal (2005)Érdi Vízisport Kft | 04:40.02 100.681% | 27.03 | ||
| 21 | Páva Olivér (2008)A Jövő SC | 04:40.87 101.043% | 27.88 | ||
| 22 | Jafari Ali (2004)MÚSZ | 04:43.49 95.956% | 30.50 | ||
| 23 | Páva Szabolcs (2006)A Jövő SC | 04:47.89 99.679% | 34.90 | ||
| - | Sárközi Szabolcs (2007)Kaposvári SI | DNS - | |||
| - | Verrasztó Dávid (1988)Ferencvárosi Torna Club | DNS - | |||