| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 2 | Hegede Balázs Soma (2012)Iron Swim SE | 36.91R:0.61 | - | 265 | |
| 2 | 6 | Kurucz Áron (2013)Váci Vízmű SE | 38.88R:0.55 | 01.97 | 226 | |
| 3 | 0 | Varga Ágoston (2012)Budapesti Honvéd | 39.62 | 02.71 | 214 | |
| 4 | 7 | Rohodi Marcell (2013)Kis-Pingvin SE | 39.75R:0.53 | 02.84 | 212 | |
| 5 | 1 | Sallai Áron (2012)Aquaworm Waterpolo | 40.53R:0.45 | 03.62 | 200 | |
| 6 | 3 | Benke Richárd (2013)Bohóchal Egyesület | 40.67R:0.65 | 03.76 | 198 | |
| 7 | 8 | Horváth Vince (2013)Római Sport Egyesüle | 41.36 | 04.45 | 188 | |
| 8 | 4 | Arany Bence (2013)Iron Swim SE | 41.60R:0.86 | 04.69 | 185 | |
| 9 | 9 | Ebinger Zsombor (2015)Kőbánya Sport Club | 42.84R:0.64 | 05.93 | 169 | |
| - | 5 | Palov Péter (2011)Budapesti Honvéd | DSQ |