| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Hegedűs Marcell (2008)Budapesti Honvéd | 01:04.90 | - | 442 | |
| 2 | 5 | Csillik Béla Milán (2008)BVSC-Zugló | 01:04.99 | 00.09 | 440 | |
| 3 | 1 | Lupkovics Lázár (2008)Miskolci Sportiskola | 01:05.93 | 01.03 | 421 | |
| 4 | 2 | Zelenai Zénó (2008)BVSC-Zugló | 01:06.49 | 01.59 | 411 | |
| 5 | 3 | Csernyik Dániel (2006)NYSC | 01:06.78 | 01.88 | 406 | |
| 6 | 7 | Squor-Juhász Áron (2009)BVSC-Zugló | 01:07.30 | 02.40 | 396 | |
| 7 | 8 | Maruzs Bence (2009)Budapesti Honvéd | 01:08.09 | 03.19 | 383 | |
| 8 | 6 | Juhász Soma Andor (2008)Budapesti Honvéd | 01:08.58 | 03.68 | 374 |