| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Magda Boldizsár (2005)BVSC-Zugló | 00:25.81 | - | 628 | |
| 2 | 5 | Tóth Benedek Viktor (2006)Kőbánya Sport Club | 00:26.33 | 00:00.52 | 592 | |
| 3 | 2 | Ardjoune Abdellah (2001)MÚSZ WA | 00:26.90 | 00:01.09 | 555 | |
| 4 | 8 | Kulcsár Zalán (2004)Lőrinc Swim Team | 00:27.09 | 00:01.28 | 543 | |
| 5 | 6 | Ángyán Máté (2005)Érdi Vízisport Kft | 00:27.20 | 00:01.39 | 537 | |
| 6 | 1 | Duca Stefan-Mircea (2006)BVSC-Zugló | 00:27.23 | 00:01.42 | 535 | |
| 7 | 0 | Dominiák Ferenc (2004)BVSC-Zugló | 00:27.34 | 00:01.53 | 528 | |
| 8 | 3 | Szappanos Kristóf (2007)Budaörsi Sport Club | 00:27.40 | 00:01.59 | 525 | |
| 9 | 7 | Koncz Márton (2008)Budaörsi Sport Club | 00:27.96 | 00:02.15 | 494 | |
| 10 | 9 | Doszpoly Zsombor (2008)Miskolci Sportiskola | 00:27.98 | 00:02.17 | 493 |