| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 6 | Birkás Botond (2006)Budaörsi Sport Club | 54.10 | - | 649 | |
50m26.09 R:0.7 100m54.1028.01 -
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| 2 | 4 | Kaló Kristóf (2007)Egri Úszó Klub | 54.26 | 00.16 | 644 | |
50m25.63 R:0.67 100m54.2628.63 -
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| 3 | 3 | Paksi Zsombor (2006)Szegedi Úszó Egylet | 54.31 | 00.21 | 642 | |
50m26.26 R:0.7 100m54.3128.05 -
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| 4 | 9 | Sárközi Szabolcs (2007)Kaposvári SI | 54.61 | 00.51 | 631 | |
50m25.98 R:0.7 100m54.6128.63 -
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| 5 | 0 | Kovács-Seres Hunor (2006)DKSE Dunaújváros | 54.80 | 00.70 | 625 | |
50m26.68 R:0.75 100m54.8028.12 -
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| 5 | 8 | Papp Kristóf (2006)Szombathelyi SK SI | 54.80 | 00.70 | 625 | |
50m25.83 R:0.65 100m54.8028.97 -
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| 7 | 2 | Takács Botond (2008)FTC | 54.88 | 00.78 | 622 | |
50m26.61 R:0.7 100m54.8828.27 -
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| 8 | 7 | Gábor Dávid (2006)Lőrinc Swim Team | 55.01 | 00.91 | 618 | |
50m25.69 R:0.7 100m55.0129.32 -
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| 9 | 1 | Koroncai Mátyás (2008)BVSC-Zugló | 55.35 | 01.25 | 606 | |
50m26.91 R:0.74 100m55.3528.44 -
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| 10 | 5 | Szappanos Kristóf (2007)Budaörsi Sport Club | 55.45 | 01.35 | 603 | |
50m26.60 R:0.74 100m55.4528.85 -
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