| RK | LN | Name | Time | Gap | FINA | Q? | 
|---|---|---|---|---|---|---|
| 1 | 4 | Takács Dominik Robertó (2007) UNI Győri Úszó Sportegy. | 00:59.11 | - | 585 | |
50m00:26.92 R:0.67 100m00:59.1100:32.19 -
                                      | ||||||
| 2 | 3 | Julien Niederberger (2005)Lausanne Aquatics | 00:59.49 | 00:00.38 | 574 | |
50m00:27.62 R:0.65 100m00:59.4900:31.87 -
                                      | ||||||
| 3 | 1 | Kováts Alex (2006) UNI Győri Úszó Sportegy. | 00:59.84 | 00:00.73 | 564 | |
50m00:28.21 R:0.69 100m00:59.8400:31.63 -
                                      | ||||||
| 4 | 2 | Stjepan Rjashko (2006)Zralok nova Paka | 01:00.90 | 00:01.79 | 535 | |
50m00:29.53 R:0.67 100m01:00.9000:31.37 -
                                      | ||||||
| 5 | 5 | Kulcsár Barnabás (2007) UNI Győri Úszó Sportegy. | 01:01.62 | 00:02.51 | 516 | |
50m00:28.50 R:0.65 100m01:01.6200:33.12 -
                                      | ||||||
| 6 | 6 | Tarkovács Alex (2006) UNI Győri Úszó Sportegy. | 01:01.81 | 00:02.70 | 512 | |
50m00:29.53 R:0.65 100m01:01.8100:32.28 -
                                      | ||||||
| 7 | 7 | Deák Levente (2005) UNI Győri Úszó Sportegy. | 01:03.86 | 00:04.75 | 464 | |
50m00:29.61 R:0.76 100m01:03.8600:34.25 -
                                      | ||||||
| 8 | 8 | Bergendi Gellért (2011) UNI Győri Úszó Sportegy. | 01:06.29 | 00:07.18 | 415 | |
50m00:31.04 R:0.62 100m01:06.2900:35.25 -
                                      | ||||||
| 9 | 0 | Hegede Balázs Soma (2012)Iron Swim SE | 01:13.72 | 00:14.61 | 301 | |
50m00:34.50 R:0.72 100m01:13.7200:39.22 -
                                      | ||||||
| 10 | 9 | Arany Bence (2013)Iron Swim SE | 01:15.04 | 00:15.93 | 286 | |
50m00:34.66 R:0.72 100m01:15.0400:40.38 -
                                      | ||||||