| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Bayer Valentin (1999)Team Austria | 00:27.42R:0.65 | - | 847 | |
| 2 | 5 | Robinson Adrian (2000)Aqua Development | 00:28.29R:0.61 | 00:00.87 | 771 | |
| 3 | 7 | Egri-Martin Marcos (2004)BVSC-Zugló | 00:28.70R:0.66 | 00:01.28 | 739 | |
| 4 | 3 | Gál Olivér (2001)Debreceni Sportc. SI | 00:28.76R:0.63 | 00:01.34 | 734 | |
| 5 | 6 | Eszes János Márk (2006)Újpesti Torna Egylet | 00:28.81R:0.62 | 00:01.39 | 730 | |
| 6 | 1 | Horváth Dávid (1996)Kőbánya Sport Club | 00:28.95R:0.7 | 00:01.53 | 720 | |
| 7 | 2 | Fábián Donát Attila (2001)A Jövő SC | 00:29.05R:0.63 | 00:01.63 | 712 | |
| 8 | 8 | Sámóczi Milán (2005)Vasas Sport Club | 00:29.07R:0.69 | 00:01.65 | 711 |