| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 5 | Gyenge-Takács Dávid (2012)Debreceni Sportc. SI | 36.81R:0.74 | - | 350 | |
| 2 | 3 | Hürkecz Gergő (2012)Ferencvárosi Torna Club | 38.27R:0.61 | 01.46 | 311 | |
| 3 | 4 | Vsevolod Smolin (2011)Ukrajna (BVSC) | 38.29R:0.64 | 01.48 | 311 | |
| 4 | 6 | Mészáros Marcell Mór (2012)Százhalombattai VUKSE | 38.80R:0.73 | 01.99 | 299 | |
| 5 | 2 | Zirner Dávid (2012)Váci Vízmű SE | 39.46R:0.78 | 02.65 | 284 | |
| 6 | 1 | Németh Boldizsár (2012)Hullám 91 | 40.04R:0.89 | 03.23 | 272 | |
| 7 | 7 | Alexandru Sebastián (2013)Ferencvárosi Torna Club | 41.93R:0.67 | 05.12 | 237 | |
| 8 | 8 | Pap Marcell Ferenc (2012)Iron Swim SE | 42.62R:0.78 | 05.81 | 225 | |
| 9 | 0 | Pusztai Dániel (2013)Budapesti Honvéd SE | 46.29R:0.76 | 09.48 | 176 | |
| - | 9 | Tóth Benjámin Gergő (2011)Érdi Vízisport Kft | DNS |