| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Hupka Adam Timotej (2007)TEAM Slovakia | 00:25.37 | - | 676 | |
| 2 | 6 | Černák Adam (2007)TEAM Slovakia | 00:25.41 | 00:00.04 | 673 | |
| 3 | 5 | Sciranka Ján (2008)TEAM Slovakia | 00:25.60 | 00:00.23 | 658 | |
| 4 | 3 | Kormos Kristóf (2004)Egri Úszó Klub SE | 00:25.62 | 00:00.25 | 656 | |
| 5 | 8 | Kaiser Dominik (2007)Budapesti Honvéd SE | 00:25.63 | 00:00.26 | 656 | |
| 6 | 2 | Miloš Kollár (2008)TEAM Slovakia | 00:25.67 | 00:00.30 | 652 | |
| 7 | 1 | Kennedy Valér Huba (2005) UNI Győri Úszó Sportegy. | 00:25.80 | 00:00.43 | 643 | |
| 8 | 7 | Fazekas Ádám (2005)Miskolci Sportiskola | 00:26.04 | 00:00.67 | 625 |