| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Andor Benedek (2004)Győri Úszó Sportegy. | 50.99 | - | 778 | |
50m24.65 100m50.9926.34 +1.69
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| 2 | 5 | Tompos Zoltán (2003)Kőbánya Sport Club | 52.08 | 01.09 | 730 | |
50m24.90 100m52.0827.18 +2.28
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| 3 | 3 | Bujdosó Zsombor (2004)Vasas Sport Club | 53.20 | 02.21 | 685 | |
50m25.56 100m53.2027.64 +2.08
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| 4 | 2 | Forgács Bence (2005)Vasas Sport Club | 53.68 | 02.69 | 667 | |
50m26.23 100m53.6827.45 +1.22
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| 5 | 1 | Duca Stefan-Mircea (2006)Egri Úszó Klub | 54.40 | 03.41 | 641 | |
50m26.52 100m54.4027.88 +1.36
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| 6 | 6 | Nagy Csongor Benedek (2006)Újpesti Torna Egylet | 54.56 | 03.57 | 635 | |
50m25.75 100m54.5628.81 +3.06
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| 7 | 7 | Koós Márton Balázs (2005)Vasas Sport Club | 55.14 | 04.15 | 615 | |
50m26.62 100m55.1428.52 +1.9
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| 8 | 8 | Nemes Boldizsár (2005)A Jövő SC | 56.42 | 05.43 | 574 | |
50m27.06 100m56.4229.36 +2.3
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