| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Bóta-Depinyi Soma (2006)Lőrinc Swim Team | 54.99 | - | 618 | |
50m26.03 R:0.68 100m54.9928.96 -
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| 2 | 5 | PEŤKOVSKÝ Šimon (2007)Plavecky oddiel KomKo Komárno | 55.98 | 00.99 | 586 | |
50m26.85 R:0.66 100m55.9829.13 -
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| 3 | 6 | Molnár-Végh Bálint (2009)Szombathelyi SK SI | 56.13 | 01.14 | 581 | |
50m26.60 R:0.67 100m56.1329.53 -
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| 4 | 8 | Koch Ambrus (2008)Soproni Széchy T. SI | 56.75 | 01.76 | 563 | |
50m27.07 R:0.71 100m56.7529.68 -
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| 5 | 3 | Pozsonyi Koppány (2009)Szombathelyi SK SI | 56.82 | 01.83 | 560 | |
50m27.47 R:0.65 100m56.8229.35 -
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| 6 | 0 | Bláha Sebastián (2006)VŠK FTVŠ UK Lafranconi | 57.12 | 02.13 | 552 | |
50m27.53 R:0.63 100m57.1229.59 -
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| 7 | 1 | Tichý Oliver (2008)VŠK FTVŠ UK Lafranconi | 58.01 | 03.02 | 527 | |
50m27.99 R:0.65 100m58.0130.02 -
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| 8 | 9 | Kovencz Áron (2007)Kaposvári Adorján | 58.20 | 03.21 | 521 | |
50m27.91 R:0.65 100m58.2030.29 -
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| 9 | 7 | Gadányi Márk (2008)NivoMed Egyesület | 58.39 | 03.40 | 516 | |
50m27.68 R:0.56 100m58.3930.71 -
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| 10 | 2 | Tadits Bertalan (2008)Mohácsi Torna Egylet | 59.70 | 04.71 | 483 | |
50m27.99 R:0.75 100m59.7031.71 -
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