| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 4 | Kubicsek Kornél (2010)KVSC | 01:02.96 | - | 412 | |
| 2 | 5 | Endre Barna (2008)JOGGING PLUS | 01:03.64 | 00.68 | 399 | |
| 3 | 3 | Valkai Örs (2012)Monori Sport Egyes. | 01:04.52 | 01.56 | 383 | |
| 4 | 6 | Varga Attila Hunor (2012)Tótkomlósi UE | 01:05.93 | 02.97 | 359 | |
| 5 | 2 | Bakai Zente (2009)SZVUK (régi) | 01:06.77 | 03.81 | 345 | |
| 6 | 8 | Komáromy Vilmos István (2012)SZVUK (régi) | 01:07.62 | 04.66 | 332 | |
| 7 | 0 | Székely Levente (2011)KVSC | 01:08.46 | 05.50 | 320 | |
| 8 | 1 | Albert-Sárközi Barnabás (2010)SZVUK (régi) | 01:09.48 | 06.52 | 306 | |
| - | 7 | Maros Dávid (2009)KUVE | VL | |||
| - | 9 | Magyar Botond (2009)KUVE | VL |