| RK | LN | Name | Time | Gap | FINA | Q? |
|---|---|---|---|---|---|---|
| 1 | 3 | Huszár Bálint (2015)MATE - GEAC | 41.02 | - | 132 | |
| 2 | 4 | Bayer Kilián (2015)Egri Vízilabda Klub | 42.09 | 01.07 | 122 | |
| 3 | 5 | Széll Péter (2014)II. Kerületi Sport | 43.63 | 02.61 | 110 | |
| 4 | 7 | Kovács Kálmán Kristóf (2014)Debreceni Sportc. SI | 45.06 | 04.04 | 99 | |
| 5 | 2 | Kardos Tibor Kristóf (2015)Ferencvárosi Torna Club | 45.57 | 04.55 | 96 | |
| 6 | 8 | Gere-Farkas Botond (2015)BVSC-Zugló | 46.64 | 05.62 | 90 | |
| 7 | 1 | Győrffy Kende (2015)II. Kerületi Sport | 46.67 | 05.65 | 89 | |
| 8 | 6 | Zsidai Dániel (2016)Ferencvárosi Torna Club | 50.31 | 09.29 | 71 |